Sample Code:
List<SetupEntityAccess> seaList = [SELECT Id, Parent.Name, Parent.Profile.Name, Parent.Profile.Id FROM SetupEntityAccess WHERE Parent.Profile.Id = :UserInfo.getProfileId() AND SetupEntityId IN (SELECT Id FROM ApexPage WHERE Name = :your_VF_page AND NamespacePrefix = :your_namespace)]; if(!seaList.isEmpty()){ //Login user have access to given VF page }else{ //login user don't have access to given VF page }